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  5. Pp3c16_20450V3.1

Pp3c16_20450V3.1


Description : No annotation


Gene families : OG0007220 (Archaeplastida) Phylogenetic Tree(s): OG0007220_tree ,
OG_05_0005183 (LandPlants) Phylogenetic Tree(s): OG_05_0005183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_20450V3.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_220V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.07 Archaeplastida
Pp3c11_26910V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.06 Archaeplastida
Pp3c11_27010V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c11_300V3.1 No alias CCCH-type zinc finger family protein 0.07 Archaeplastida
Pp3c15_40V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c1_43090V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
Pp3c5_29008V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Archaeplastida
Pp3s124_80V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!