AT4G20780 (CML42)


Aliases : CML42

Description : calmodulin like 42


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001715 (SeedPlants) Phylogenetic Tree(s): OG_06_0001715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269730 evm_27.TU.AmTr_v1... Calmodulin-like protein 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G66400 CML23 calmodulin like 23 0.02 Archaeplastida
AT2G41090 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_09082 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.14 Archaeplastida
Gb_13868 No alias Probable calcium-binding protein CML43 OS=Arabidopsis... 0.02 Archaeplastida
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os10g25010.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.02 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.17 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_105065g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 121.0) 0.04 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
Smo96597 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IDA Interproscan
MF GO:0005509 calcium ion binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0010091 trichome branching IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008506 sucrose:proton symporter activity IEP Neighborhood
MF GO:0008515 sucrose transmembrane transporter activity IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
MF GO:0009669 sucrose:cation symporter activity IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015154 disaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 119 184
IPR002048 EF_hand_dom 30 57
No external refs found!