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  5. Pp3c16_21410V3.1

Pp3c16_21410V3.1


Description : homeobox 1


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_21410V3.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00214750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00010p00253290 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.02 Archaeplastida
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.03 Archaeplastida
GSVIVT01008065001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Gb_00961 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_35116 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os02g49700.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Mp3g02320.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc02g077590.1.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc09g008810.3.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Zm00001e002803_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e004824_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!