Pp3c16_280V3.1


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG0006977 (Archaeplastida) Phylogenetic Tree(s): OG0006977_tree ,
OG_05_0005354 (LandPlants) Phylogenetic Tree(s): OG_05_0005354_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_280V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00239430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04810,... 0.02 Archaeplastida
AT5G04810 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Archaeplastida
GSVIVT01034651001 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.09 Archaeplastida
Gb_31760 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.02 Archaeplastida
LOC_Os04g58780.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.07 Archaeplastida
MA_10434757g0010 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.07 Archaeplastida
Solyc04g009720.1.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.04 Archaeplastida
Solyc04g009730.4.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.04 Archaeplastida
Solyc11g006680.3.1 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.09 Archaeplastida
Zm00001e041970_P002 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!