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  5. Pp3c16_6220V3.1

Pp3c16_6220V3.1


Description : tubulin alpha-3


Gene families : OG0000426 (Archaeplastida) Phylogenetic Tree(s): OG0000426_tree ,
OG_05_0000313 (LandPlants) Phylogenetic Tree(s): OG_05_0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_6220V3.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
AT1G64740 TUA1 alpha-1 tubulin 0.02 Archaeplastida
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.03 Archaeplastida
AT5G19770 TUA3 tubulin alpha-3 0.02 Archaeplastida
GSVIVT01009258001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Gb_00907 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_5963g0010 No alias Tubulin alpha-2 chain OS=Eleusine indica... 0.03 Archaeplastida
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp8g12620.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Smo100162 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo230143 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo233518 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 2 207
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 257 386
No external refs found!