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  5. Pp3c16_6460V3.1

Pp3c16_6460V3.1


Description : cycling DOF factor 2


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0018924 (LandPlants) Phylogenetic Tree(s): OG_05_0018924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_6460V3.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT3G50410 OBP1 OBF binding protein 1 0.02 Archaeplastida
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
Cre12.g521150 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.01 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01003947001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01027184001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_07177 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g55340.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_97259g0020 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c17_23300V3.1 No alias cycling DOF factor 3 0.05 Archaeplastida
Pp3c17_7930V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Smo89924 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.08 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e001988_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015701_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e019764_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023435_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!