1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c16_6830V3.1

Pp3c16_6830V3.1


Description : DNA-binding family protein


Gene families : OG0000902 (Archaeplastida) Phylogenetic Tree(s): OG0000902_tree ,
OG_05_0006267 (LandPlants) Phylogenetic Tree(s): OG_05_0006267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_6830V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072490 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
AT2G47620 SWI3A, CHB1, ATSWI3A SWITCH/sucrose nonfermenting 3A 0.02 Archaeplastida
AT4G34430 CHB3, ATSWI3D DNA-binding family protein 0.05 Archaeplastida
Cre08.g364050 No alias Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
GSVIVT01008584001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01008831001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01031951001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
LOC_Os12g07730.1 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
MA_10426514g0020 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
MA_10426836g0010 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
MA_10432371g0010 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
MA_10435735g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Pp3c10_9060V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.02 Archaeplastida
Pp3c2_24980V3.1 No alias switch subunit 3 0.03 Archaeplastida
Solyc01g109510.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
Solyc04g082760.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Zm00001e024548_P001 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!