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  5. Pp3c16_7480V3.1

Pp3c16_7480V3.1


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_7480V3.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.05 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.02 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 Archaeplastida
GSVIVT01013452001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os02g07780.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.01 Archaeplastida
MA_20537g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.01 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Solyc01g090730.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e021425_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.01 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!