Pp3c16_7540V3.1


Description : squamosa promoter binding protein-like 8


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_7540V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00106940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.02 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 Archaeplastida
AT3G60030 SPL12 squamosa promoter-binding protein-like 12 0.02 Archaeplastida
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
GSVIVT01010496001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01028208001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01032239001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_23724 No alias transcription factor (SBP) 0.01 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10049111g0010 No alias transcription factor (SBP) 0.01 Archaeplastida
MA_10432997g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.03 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc05g053240.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e028442_P002 No alias transcription factor (SBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!