AT4G21330 (DYT1)

Aliases : DYT1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0013959 (SeedPlants) Phylogenetic Tree(s): OG_06_0013959_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G21330
Cluster	HCCA: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
AT5G65640	bHLH093	beta HLH protein 93	0.04	Archaeplastida
GSVIVT01004405001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.05	Archaeplastida
GSVIVT01008637001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.05	Archaeplastida
GSVIVT01009234001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	Archaeplastida
GSVIVT01013720001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.05	Archaeplastida
GSVIVT01013744001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.07	Archaeplastida
GSVIVT01013745001	No alias	Transcription factor bHLH90 OS=Arabidopsis thaliana	0.06	Archaeplastida
GSVIVT01024008001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.05	Archaeplastida
Gb_15579	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Gb_26391	No alias	transcription factor (bHLH)	0.03	Archaeplastida
LOC_Os02g02820.1	No alias	transcription factor (bHLH)	0.07	Archaeplastida
Mp2g02460.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c1_20960V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.02	Archaeplastida
Smo431375	No alias	No description available	0.03	Archaeplastida
Solyc02g079810.3.1	No alias	transcription factor (bHLH)	0.07	Archaeplastida
Solyc02g091690.3.1	No alias	transcription factor (bHLH)	0.02	Archaeplastida
Solyc05g005300.2.1	No alias	transcription factor (bHLH)	0.05	Archaeplastida
Solyc06g051550.4.1	No alias	transcription factor (bHLH). iron uptake transcription factor FIT	0.03	Archaeplastida
Solyc08g062780.2.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida
Solyc12g088130.3.1	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e008463_P008	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e013304_P003	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e021526_P001	No alias	transcription factor (bHLH). transcription factor (ICE1\|2)	0.03	Archaeplastida
Zm00001e025243_P003	No alias	transcription factor (bHLH)	0.04	Archaeplastida
Zm00001e040186_P002	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e040732_P001	No alias	transcription factor (bHLH)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IMP	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048658	anther wall tapetum development	IMP	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048654	anther morphogenesis	IEP	Neighborhood
BP	GO:0055046	microgametogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	35	78

External Links

No external refs found!

AT4G21330 (DYT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation