Pp3c17_1210V3.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0002304 (Archaeplastida) Phylogenetic Tree(s): OG0002304_tree ,
OG_05_0002049 (LandPlants) Phylogenetic Tree(s): OG_05_0002049_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_1210V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00165100 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G52660 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
AT4G00830 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Cpa|evm.model.tig00020961.20 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020961.48 No alias No description available 0.02 Archaeplastida
LOC_Os11g14430.2 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
Mp1g12580.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida
Smo169951 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc09g009890.4.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009199_P001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e021852_P001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!