1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c17_13780V3.1

Pp3c17_13780V3.1


Description : DNA mismatch repair protein MutS, type 2


Gene families : OG0002173 (Archaeplastida) Phylogenetic Tree(s): OG0002173_tree ,
OG_05_0007295 (LandPlants) Phylogenetic Tree(s): OG_05_0007295_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_13780V3.1
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.149 No alias No description available 0.01 Archaeplastida
GSVIVT01038675001 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.03 Archaeplastida
Gb_24817 No alias DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_263724g0010 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo141299 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g078390.3.1 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.03 Archaeplastida
Solyc03g080010.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e012571_P001 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!