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  5. Pp3c17_14100V3.1

Pp3c17_14100V3.1


Description : RHOMBOID-like 1


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_14100V3.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00097470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
AMTR_s00070p00195850 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
AMTR_s00104p00044730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.05 Archaeplastida
AT1G77860 KOM Rhomboid-related intramembrane serine protease family protein 0.03 Archaeplastida
AT2G29050 RBL1, ATRBL1 RHOMBOID-like 1 0.01 Archaeplastida
GSVIVT01008957001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01017301001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01034160001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Gb_20562 No alias protease (RBL) 0.02 Archaeplastida
Gb_37376 No alias protease (RBL) 0.01 Archaeplastida
LOC_Os08g43320.1 No alias protease (RBL) 0.03 Archaeplastida
LOC_Os10g37760.1 No alias protease (RBL) 0.04 Archaeplastida
LOC_Os11g47840.1 No alias protease (RBL) 0.02 Archaeplastida
MA_128457g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c18_13020V3.1 No alias RHOMBOID-like 1 0.02 Archaeplastida
Pp3c23_15050V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Smo84059 No alias Protein degradation.peptidase families.serine-type... 0.01 Archaeplastida
Solyc06g005580.4.1 No alias protease (RBL) 0.03 Archaeplastida
Solyc10g050105.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g013320.2.1 No alias protease (RBL) 0.02 Archaeplastida
Zm00001e002140_P002 No alias protease (RBL) 0.02 Archaeplastida
Zm00001e007219_P001 No alias protease (RBL) 0.02 Archaeplastida
Zm00001e020946_P003 No alias protease (RBL) 0.03 Archaeplastida
Zm00001e024265_P001 No alias protease (RBL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!