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  5. Pp3c17_20140V3.1

Pp3c17_20140V3.1


Description : No annotation


Gene families : OG0004698 (Archaeplastida) Phylogenetic Tree(s): OG0004698_tree ,
OG_05_0006538 (LandPlants) Phylogenetic Tree(s): OG_05_0006538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_20140V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00104770 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.COG... 0.02 Archaeplastida
AT4G01395 No alias No description available 0.04 Archaeplastida
Cre06.g287250 No alias Vesicle trafficking.target membrane tethering.COG... 0.01 Archaeplastida
Gb_28100 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.05 Archaeplastida
LOC_Os02g25840.1 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.04 Archaeplastida
MA_90828g0010 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.04 Archaeplastida
Smo230075 No alias Vesicle trafficking.target membrane tethering.COG... 0.05 Archaeplastida
Solyc07g056010.3.1 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.07 Archaeplastida
Zm00001e000525_P002 No alias component COG4 of COG (Conserved-Oligomeric Golgi) complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!