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  5. Pp3c17_3180V3.1

Pp3c17_3180V3.1


Description : nuclear RNA polymerase D1A


Gene families : OG0000599 (Archaeplastida) Phylogenetic Tree(s): OG0000599_tree ,
OG_05_0006334 (LandPlants) Phylogenetic Tree(s): OG_05_0006334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_3180V3.1

Target Alias Description ECC score Gene Family Method Actions
Gb_11654 No alias subunit 1 of Pol IV RNA polymerase 0.02 Archaeplastida
Gb_21425 No alias subunit 1 of Pol V RNA polymerase 0.02 Archaeplastida
LOC_Os04g41490.1 No alias subunit 1 of Pol III RNA polymerase 0.01 Archaeplastida
LOC_Os04g48370.1 No alias subunit 1 of Pol IV RNA polymerase 0.06 Archaeplastida
MA_10436091g0010 No alias DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_8544g0010 No alias subunit 1 of Pol II RNA polymerase 0.01 Archaeplastida
MA_8720349g0010 No alias subunit 1 of Pol V RNA polymerase 0.02 Archaeplastida
Pp3c14_14540V3.1 No alias RNA polymerase II large subunit 0.07 Archaeplastida
Smo442419 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.01 Archaeplastida
Solyc08g080220.3.1 No alias subunit 1 of Pol IV RNA polymerase 0.07 Archaeplastida
Zm00001e025206_P001 No alias subunit 1 of Pol V RNA polymerase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!