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  5. AT4G22080

AT4G22080 (RHS14)


Aliases : RHS14

Description : root hair specific 14


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0025026 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G22080
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AT1G30350 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G24230 No alias Pectate lyase family protein 0.05 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT4G13210 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G04310 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G09280 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G55720 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01014682001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01016208001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01016209001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.06 Archaeplastida
GSVIVT01033671001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.04 Archaeplastida
LOC_Os06g05209.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g05272.1 No alias pectate lyase 0.02 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.02 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10332686g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10353668g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.03 Archaeplastida
MA_10430145g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.02 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.02 Archaeplastida
MA_474372g0010 No alias pectate lyase 0.01 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.03 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.04 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.03 Archaeplastida
Mp2g24480.1 No alias pectate lyase 0.01 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.04 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.02 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c1_4040V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c3_20320V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Smo421677 No alias Probable pectate lyase 9 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.05 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc03g111690.4.1 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0016829 lyase activity ISS Interproscan
MF GO:0030570 pectate lyase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009943 adaxial/abaxial axis specification IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015271 outward rectifier potassium channel activity IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030638 polyketide metabolic process IEP Neighborhood
BP GO:0030639 polyketide biosynthetic process IEP Neighborhood
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035445 borate transmembrane transport IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046713 borate transport IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0051791 medium-chain fatty acid metabolic process IEP Neighborhood
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0072532 tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072533 tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072547 tricoumaroylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072548 dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072549 monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072550 triferuloylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072551 diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072552 monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0080012 trihydroxyferuloyl spermidine O-methyltransferase activity IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080072 spermidine:sinapoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080073 spermidine:coumaroyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080074 spermidine:caffeoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080075 spermidine:feruloyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080076 caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
MF GO:0080077 trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
MF GO:0080078 tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity IEP Neighborhood
BP GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process IEP Neighborhood
BP GO:0080110 sporopollenin biosynthetic process IEP Neighborhood
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0098661 inorganic anion transmembrane transport IEP Neighborhood
BP GO:1900150 regulation of defense response to fungus IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 128 311
No external refs found!