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  5. Pp3c17_5740V3.1

Pp3c17_5740V3.1


Description : Sec1/munc18-like (SM) proteins superfamily


Gene families : OG0004146 (Archaeplastida) Phylogenetic Tree(s): OG0004146_tree ,
OG_05_0006964 (LandPlants) Phylogenetic Tree(s): OG_05_0006964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_5740V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016224001 No alias Vesicle trafficking.target membrane... 0.07 Archaeplastida
Gb_31715 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.05 Archaeplastida
LOC_Os04g14654.2 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.03 Archaeplastida
Mp4g15500.1 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.02 Archaeplastida
Solyc05g055600.4.1 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.02 Archaeplastida
Zm00001e027747_P001 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!