Pp3c17_5990V3.1


Description : tRNA synthetase class I (I, L, M and V) family protein


Gene families : OG0002699 (Archaeplastida) Phylogenetic Tree(s): OG0002699_tree ,
OG_05_0002798 (LandPlants) Phylogenetic Tree(s): OG_05_0002798_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_5990V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00205250 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.09 Archaeplastida
AT5G49030 OVA2 tRNA synthetase class I (I, L, M and V) family protein 0.14 Archaeplastida
Cpa|evm.model.tig00000630.10 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre16.g689871 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 Archaeplastida
GSVIVT01017762001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 Archaeplastida
Gb_29585 No alias Isoleucine--tRNA ligase, chloroplastic/mitochondrial... 0.03 Archaeplastida
LOC_Os02g53770.1 No alias isoleucine-tRNA ligase 0.06 Archaeplastida
MA_5781602g0010 No alias Isoleucine--tRNA ligase, chloroplastic/mitochondrial... 0.02 Archaeplastida
Mp1g26370.1 No alias isoleucine-tRNA ligase 0.11 Archaeplastida
Smo437676 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida
Smo445517 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida
Solyc01g080810.3.1 No alias isoleucine-tRNA ligase 0.1 Archaeplastida
Zm00001e016040_P001 No alias isoleucine-tRNA ligase 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!