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  5. Pp3c17_6540V3.1

Pp3c17_6540V3.1


Description : translocon at the inner envelope membrane of chloroplasts 110


Gene families : OG0004554 (Archaeplastida) Phylogenetic Tree(s): OG0004554_tree ,
OG_05_0004804 (LandPlants) Phylogenetic Tree(s): OG_05_0004804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_6540V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00132450 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.1 Archaeplastida
AT1G06950 TIC110, ATTIC110 translocon at the inner envelope membrane of chloroplasts 110 0.17 Archaeplastida
Cpa|evm.model.tig00020961.104 No alias Protein translocation.chloroplast.inner envelope TIC... 0.01 Archaeplastida
Cre10.g452450 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 Archaeplastida
GSVIVT01024601001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.07 Archaeplastida
LOC_Os10g35030.1 No alias component Tic110 of inner envelope TIC translocation system 0.02 Archaeplastida
MA_207104g0010 No alias component Tic110 of inner envelope TIC translocation system 0.02 Archaeplastida
MA_76221g0010 No alias component Tic110 of inner envelope TIC translocation system 0.06 Archaeplastida
Mp1g27360.1 No alias component Tic110 of inner envelope TIC translocation system 0.08 Archaeplastida
Solyc09g031780.3.1 No alias component Tic110 of inner envelope TIC translocation system 0.09 Archaeplastida
Zm00001e004499_P001 No alias component Tic110 of inner envelope TIC translocation system 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!