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  5. Pp3c18_11070V3.1

Pp3c18_11070V3.1


Description : nuclear RNA polymerase C2


Gene families : OG0000520 (Archaeplastida) Phylogenetic Tree(s): OG0000520_tree ,
OG_05_0004157 (LandPlants) Phylogenetic Tree(s): OG_05_0004157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_11070V3.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00246930 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 Archaeplastida
AT5G45140 NRPC2 nuclear RNA polymerase C2 0.04 Archaeplastida
Cpa|evm.model.tig00000158.16 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 Archaeplastida
Cre02.g075150 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 Archaeplastida
GSVIVT01036596001 No alias DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_30006 No alias subunit 2 of Pol II RNA polymerase 0.02 Archaeplastida
LOC_Os03g28960.1 No alias DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp4g21160.1 No alias subunit 2 of Pol II RNA polymerase 0.02 Archaeplastida
Mp6g06170.1 No alias subunit 2 of Pol III RNA polymerase 0.03 Archaeplastida
Zm00001e012400_P001 No alias subunit 2 of Pol II RNA polymerase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!