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  5. Pp3c18_13570V3.1

Pp3c18_13570V3.1


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG0004975 (Archaeplastida) Phylogenetic Tree(s): OG0004975_tree ,
OG_05_0004978 (LandPlants) Phylogenetic Tree(s): OG_05_0004978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_13570V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00203240 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 Archaeplastida
AMTR_s00354p00009120 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.1 Archaeplastida
AT3G48500 PTAC10, PDE312 Nucleic acid-binding, OB-fold-like protein 0.15 Archaeplastida
Cre07.g348500 No alias No description available 0.04 Archaeplastida
GSVIVT01008490001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 Archaeplastida
Gb_30753 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.11 Archaeplastida
Gb_30755 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_30756 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g67570.1 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.18 Archaeplastida
MA_10428299g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10435142g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_14025g0020 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.06 Archaeplastida
Mp4g08250.1 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.21 Archaeplastida
Smo438805 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.09 Archaeplastida
Solyc03g111050.3.1 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.16 Archaeplastida
Zm00001e028549_P001 No alias PAP3/TAC10 cofactor of plastid-encoded RNA polymerase 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!