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  5. Pp3c18_17330V3.1

Pp3c18_17330V3.1


Description : syntaxin of plants 124


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0089735 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_17330V3.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 Archaeplastida
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
MA_28961g0010 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
MA_6119g0010 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.03 Archaeplastida
Smo151097 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 47 252
IPR000727 T_SNARE_dom 254 305
No external refs found!