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  5. Pp3c18_18616V3.1

Pp3c18_18616V3.1


Description : No annotation


Gene families : OG0000163 (Archaeplastida) Phylogenetic Tree(s): OG0000163_tree ,
OG_05_0000066 (LandPlants) Phylogenetic Tree(s): OG_05_0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_18616V3.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_9503V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c11_13940V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Archaeplastida
Pp3c11_21080V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
Pp3c11_22090V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Archaeplastida
Pp3c11_22193V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c11_3290V3.1 No alias ACT-like protein tyrosine kinase family protein 0.04 Archaeplastida
Pp3c12_3030V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c12_3810V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c12_3820V3.1 No alias Protein kinase family protein 0.07 Archaeplastida
Pp3c13_21690V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c13_2500V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) 0.07 Archaeplastida
Pp3c13_2900V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c13_2920V3.1 No alias Protein kinase family protein 0.04 Archaeplastida
Pp3c13_3150V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Archaeplastida
Pp3c14_12470V3.1 No alias MAPK/ERK kinase kinase 3 0.07 Archaeplastida
Pp3c14_13230V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Archaeplastida
Pp3c14_1440V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Archaeplastida
Pp3c15_960V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Archaeplastida
Pp3c15_970V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c16_19550V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c16_21730V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c16_21740V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c17_18950V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c17_20937V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_21563V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c17_21566V3.1 No alias Protein kinase superfamily protein 0.08 Archaeplastida
Pp3c17_21570V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c17_8727V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c17_8740V3.1 No alias Protein kinase family protein 0.06 Archaeplastida
Pp3c18_22270V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c20_12310V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c20_1301V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c20_15970V3.1 No alias VH1-interacting kinase 0.02 Archaeplastida
Pp3c20_20760V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c20_21210V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
Pp3c20_3010V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c21_14710V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
Pp3c21_14720V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3c21_18280V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c21_18290V3.1 No alias Protein kinase family protein 0.06 Archaeplastida
Pp3c21_6250V3.1 No alias Protein kinase family protein 0.06 Archaeplastida
Pp3c23_980V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c25_5920V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.09 Archaeplastida
Pp3c2_12950V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
Pp3c2_13120V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
Pp3c2_13130V3.1 No alias Protein kinase superfamily protein with... 0.06 Archaeplastida
Pp3c2_26150V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3c3_11530V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c3_21800V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c3_30860V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c3_30880V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
Pp3c3_30890V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c6_12460V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c6_6000V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c7_17410V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c7_21000V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
Pp3c7_21870V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) 0.02 Archaeplastida
Pp3c7_21890V3.1 No alias Protein kinase family protein 0.04 Archaeplastida
Pp3c8_13790V3.1 No alias Protein kinase family protein 0.05 Archaeplastida
Pp3c8_2160V3.1 No alias mitogen-activated protein kinase kinase 4 0.02 Archaeplastida
Pp3c8_22280V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c9_1270V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c9_16390V3.1 No alias Protein kinase family protein 0.07 Archaeplastida
Pp3c9_16400V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c9_1940V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.06 Archaeplastida
Pp3c9_9314V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3s1178_10V3.1 No alias No annotation 0.05 Archaeplastida
Pp3s203_50V3.1 No alias No annotation 0.03 Archaeplastida
Pp3s876_30V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!