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Description : chromatin remodeling factor CHD3 (PICKLE)
Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree ,
OG_05_0005856 (LandPlants) Phylogenetic Tree(s): OG_05_0005856_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c18_19040V3.1 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00086p00165640 | evm_27.TU.AmTr_v1... | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| AMTR_s00090p00148990 | evm_27.TU.AmTr_v1... | Chromatin organisation.chromatin remodeling... | 0.06 | Archaeplastida | |
| AMTR_s00148p00090060 | evm_27.TU.AmTr_v1... | Helicase protein MOM1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| AT1G08060 | MOM1, MOM | ATP-dependent helicase family protein | 0.02 | Archaeplastida | |
| AT2G13370 | CHR5 | chromatin remodeling 5 | 0.03 | Archaeplastida | |
| AT2G25170 | PKL, GYM, CHR6,... | chromatin remodeling factor CHD3 (PICKLE) | 0.04 | Archaeplastida | |
| AT2G28290 | SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | Archaeplastida | |
| AT2G46020 | CHA2, CHR2, BRM, ATBRM | transcription regulatory protein SNF2, putative | 0.03 | Archaeplastida | |
| AT5G44800 | PKR1, CHR4 | chromatin remodeling 4 | 0.06 | Archaeplastida | |
| ChrUn.fgenesh.mRNA.85 | No alias | chromatin remodeling factor (Iswi) | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000350.9 | No alias | CHD3-type chromatin-remodeling factor PICKLE... | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000983.26 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.01 | Archaeplastida | |
| Cpa|evm.model.tig00020960.24 | No alias | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Cre03.g179300 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | Archaeplastida | |
| Cre07.g325700 | No alias | ATP-dependent helicase BRM OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Cre08.g377200 | No alias | CHD3-type chromatin-remodeling factor PICKLE... | 0.03 | Archaeplastida | |
| Cre12.g537671 | No alias | Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01012117001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | Archaeplastida | |
| GSVIVT01017821001 | No alias | No description available | 0.04 | Archaeplastida | |
| GSVIVT01017921001 | No alias | Chromatin organisation.chromatin remodeling... | 0.05 | Archaeplastida | |
| GSVIVT01025216001 | No alias | Helicase protein MOM1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| GSVIVT01026952001 | No alias | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| GSVIVT01035901001 | No alias | Chromatin organisation.chromatin remodeling... | 0.04 | Archaeplastida | |
| GSVIVT01037235001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | Archaeplastida | |
| Gb_05671 | No alias | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | Archaeplastida | |
| Gb_27153 | No alias | chromatin remodeling factor (Snf2) | 0.02 | Archaeplastida | |
| LOC_Os02g02050.1 | No alias | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
| LOC_Os05g05230.1 | No alias | chromatin remodeling factor (Snf2) | 0.1 | Archaeplastida | |
| LOC_Os07g31450.1 | No alias | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | Archaeplastida | |
| MA_10429361g0010 | No alias | chromatin remodeling factor (Chd1). component CHR5 of... | 0.03 | Archaeplastida | |
| MA_10436824g0010 | No alias | No annotation | 0.05 | Archaeplastida | |
| MA_637555g0010 | No alias | ATP-dependent helicase BRM OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_9572741g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp1g17010.1 | No alias | chromatin remodeling factor (Snf2) | 0.03 | Archaeplastida | |
| Mp3g15030.1 | No alias | chromatin remodeling factor (Iswi) | 0.02 | Archaeplastida | |
| Pp3c13_14440V3.1 | No alias | transcription regulatory protein SNF2, putative | 0.02 | Archaeplastida | |
| Pp3c21_10800V3.1 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | Archaeplastida | |
| Smo177985 | No alias | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| Smo440203 | No alias | Chromatin organisation.chromatin remodeling... | 0.02 | Archaeplastida | |
| Smo440815 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
| Solyc01g067390.4.1 | No alias | chromatin remodeling factor (Iswi) | 0.04 | Archaeplastida | |
| Solyc01g094800.4.1 | No alias | chromatin remodeling factor (Snf2) | 0.04 | Archaeplastida | |
| Solyc06g010240.3.1 | No alias | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc11g062010.3.1 | No alias | chromatin remodeling factor (Snf2) | 0.02 | Archaeplastida | |
| Solyc12g099910.2.1 | No alias | chromatin remodeling factor (Chd1). component CHR5 of... | 0.02 | Archaeplastida | |
| Zm00001e013442_P001 | No alias | chromatin remodeling factor (Snf2) | 0.05 | Archaeplastida | |
| Zm00001e026331_P001 | No alias | chromatin remodeling factor (Iswi) | 0.02 | Archaeplastida | |
| Zm00001e036737_P001 | No alias | Helicase protein MOM1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |