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  5. Pp3c18_19720V3.1

Pp3c18_19720V3.1


Description : expansin A1


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0032216 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_19720V3.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00110p00101270 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00119p00058870 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.05 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.08 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.05 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.04 Archaeplastida
AT2G03090 EXP15, ATEXPA15,... expansin A15 0.01 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.05 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.07 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.07 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.05 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.03 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.04 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.03 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01024946001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01035233001 No alias Expansin-A13 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.05 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.04 Archaeplastida
Gb_06139 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07423 No alias alpha-class expansin 0.01 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07435 No alias alpha-class expansin 0.01 Archaeplastida
Gb_07436 No alias Expansin-A4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.05 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.04 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.06 Archaeplastida
Gb_27617 No alias Putative expansin-A17 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_33854 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06040.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06060.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.07 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_134592g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.07 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_61945g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_6583g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.08 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp1g14140.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.07 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g28890.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.05 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.05 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.08 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.08 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.09 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.05 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_13470V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.08 Archaeplastida
Pp3c8_15200V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.07 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.08 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.1 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.03 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g115345.1.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc06g005560.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g076220.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc07g063210.3.1 No alias alpha-class expansin 0.01 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.07 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e011741_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e029218_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!