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  5. Pp3c18_2470V3.1

Pp3c18_2470V3.1


Description : polyubiquitin 10


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_2470V3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT4G05320 UBQ10 polyubiquitin 10 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 231 302
No external refs found!