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  5. Pp3c18_2510V3.1

Pp3c18_2510V3.1


Description : ubiquitin 4


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_2510V3.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.02 Archaeplastida
AT4G05050 UBQ11 ubiquitin 11 0.02 Archaeplastida
AT4G05320 UBQ10 polyubiquitin 10 0.03 Archaeplastida
Gb_07386 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
Gb_28253 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
LOC_Os06g46770.2 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
LOC_Os08g08700.1 No alias Polyubiquitin 9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g08760.1 No alias Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os09g25320.1 No alias ubiquitin-fold protein (RUB) 0.02 Archaeplastida
LOC_Os10g34990.1 No alias component RPS27a of SSU proteome 0.02 Archaeplastida
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
Smo138728 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo187148 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo271198 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc10g006480.2.1 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 231 302
No external refs found!