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  5. Pp3c18_60V3.1

Pp3c18_60V3.1


Description : embryo sac development arrest 7


Gene families : OG0005615 (Archaeplastida) Phylogenetic Tree(s): OG0005615_tree ,
OG_05_0006458 (LandPlants) Phylogenetic Tree(s): OG_05_0006458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_60V3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00095730 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
Cpa|evm.model.tig00000388.46 No alias No description available 0.05 Archaeplastida
Cre03.g159950 No alias No description available 0.07 Archaeplastida
GSVIVT01033615001 No alias No description available 0.04 Archaeplastida
Gb_40390 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g03780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g13920.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Smo126756 No alias No description available 0.02 Archaeplastida
Solyc10g085580.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e036234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036633_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!