1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c18_6230V3.1

Pp3c18_6230V3.1


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0013518 (Archaeplastida) Phylogenetic Tree(s): OG0013518_tree ,
OG_05_0013300 (LandPlants) Phylogenetic Tree(s): OG_05_0013300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_6230V3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Pp3c16_23150V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.06 Archaeplastida
Pp3c21_16759V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
Pp3c21_17690V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c4_21050V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
Pp3c8_2380V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!