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  5. Pp3c18_7600V3.1

Pp3c18_7600V3.1


Description : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0000965 (LandPlants) Phylogenetic Tree(s): OG_05_0000965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_7600V3.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Gb_32328 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
LOC_Os01g25010.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.03 Archaeplastida
LOC_Os01g70930.1 No alias oxidoreductase (LBO) 0.03 Archaeplastida
LOC_Os06g07914.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g08060.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g15149.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10430508g0020 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.02 Archaeplastida
Zm00001e001714_P001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!