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  5. Pp3c19_14100V3.1

Pp3c19_14100V3.1


Description : Pre-mRNA splicing Prp18-interacting factor


Gene families : OG0004562 (Archaeplastida) Phylogenetic Tree(s): OG0004562_tree ,
OG_05_0005673 (LandPlants) Phylogenetic Tree(s): OG_05_0005673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_14100V3.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT1G65660 SMP1 Pre-mRNA splicing Prp18-interacting factor 0.02 Archaeplastida
Cpa|evm.model.tig00000217.42 No alias Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.01 Archaeplastida
Solyc06g083890.4.1 No alias Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!