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  5. Pp3c19_15140V3.1

Pp3c19_15140V3.1


Description : RNA polymerase II large subunit


Gene families : OG0006451 (Archaeplastida) Phylogenetic Tree(s): OG0006451_tree ,
OG_05_0004749 (LandPlants) Phylogenetic Tree(s): OG_05_0004749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_15140V3.1
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_4010V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c15_19420V3.1 No alias nuclear RNA polymerase A1 0.01 Archaeplastida
Pp3c1_270V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c22_9940V3.1 No alias RNA polymerase II large subunit 0.02 Archaeplastida
Pp3c4_24940V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida
Pp3c8_4620V3.1 No alias RNA polymerase II large subunit 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 1 54
No external refs found!