Pp3c19_15660V3.1

Description : RNA recognition motif (RRM)-containing protein

Gene families : OG0006543 (Archaeplastida) Phylogenetic Tree(s): OG0006543_tree ,
OG_05_0008169 (LandPlants) Phylogenetic Tree(s): OG_05_0008169_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c19_15660V3.1
Cluster	HCCA: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020603.25	No alias	Zinc finger CCCH domain-containing protein 42...	0.03	Archaeplastida
Cre06.g280550	No alias	Zinc finger CCCH domain-containing protein 42...	0.02	Archaeplastida
GSVIVT01024759001	No alias	Zinc finger CCCH domain-containing protein 25 OS=Oryza...	0.04	Archaeplastida
LOC_Os03g61110.1	No alias	Zinc finger CCCH domain-containing protein 25 OS=Oryza...	0.06	Archaeplastida
Mp8g06500.1	No alias	Zinc finger CCCH domain-containing protein 25 OS=Oryza...	0.08	Archaeplastida
Solyc03g119430.4.1	No alias	no hits & (original description: none)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	214	234
IPR000571	Znf_CCCH	135	155
IPR000504	RRM_dom	38	108

External Links

No external refs found!