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  5. Pp3c19_16320V3.1

Pp3c19_16320V3.1


Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase


Gene families : OG0003732 (Archaeplastida) Phylogenetic Tree(s): OG0003732_tree ,
OG_05_0004516 (LandPlants) Phylogenetic Tree(s): OG_05_0004516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_16320V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00057810 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.methylerythritol... 0.03 Archaeplastida
AT5G60600 CSB3, CLB4,... 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.04 Archaeplastida
Cre12.g490350 No alias Secondary metabolism.terpenoids.methylerythritol... 0.07 Archaeplastida
Gb_01895 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.02 Archaeplastida
Mp5g09870.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.03 Archaeplastida
Pp3c21_19070V3.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.03 Archaeplastida
Pp3c22_14940V3.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.02 Archaeplastida
Smo149035 No alias Secondary metabolism.terpenoids.methylerythritol... 0.03 Archaeplastida
Solyc11g069380.2.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!