1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c19_16600V3.1

Pp3c19_16600V3.1


Description : binding


Gene families : OG0002727 (Archaeplastida) Phylogenetic Tree(s): OG0002727_tree ,
OG_05_0001913 (LandPlants) Phylogenetic Tree(s): OG_05_0001913_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_16600V3.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00216390 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 Archaeplastida
GSVIVT01022187001 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 Archaeplastida
Gb_38411 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 Archaeplastida
LOC_Os06g11990.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.07 Archaeplastida
MA_10044709g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434233g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
MA_10435637g0020 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 Archaeplastida
Mp5g20900.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.05 Archaeplastida
Smo78846 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.07 Archaeplastida
Solyc04g054480.3.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.06 Archaeplastida
Solyc06g060160.3.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.01 Archaeplastida
Zm00001e036124_P001 No alias CSI-type cellulose synthase CSC-interactive protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!