1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c19_20410V3.1

Pp3c19_20410V3.1


Description : homeobox protein 21


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_20410V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00024p00085480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G14687 AtHB32, HB32, ZHD14 homeobox protein 32 0.02 Archaeplastida
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.04 Archaeplastida
AT1G74660 MIF1 mini zinc finger 1 0.02 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.03 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.06 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.04 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_18045 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_453742g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp8g08190.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.03 Archaeplastida
Pp3c22_9600V3.1 No alias homeobox protein 31 0.03 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.08 Archaeplastida
Smo38995 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo59934 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc02g087970.1.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc03g061620.1.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e034119_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!