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  5. Pp3c19_6430V3.1

Pp3c19_6430V3.1


Description : GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain


Gene families : OG0003471 (Archaeplastida) Phylogenetic Tree(s): OG0003471_tree ,
OG_05_0003246 (LandPlants) Phylogenetic Tree(s): OG_05_0003246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_6430V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00133670 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome... 0.02 Archaeplastida
AT1G17070 No alias GC-rich sequence DNA-binding factor-like protein with... 0.03 Archaeplastida
Cre07.g325713 No alias RNA processing.RNA splicing.spliceosome... 0.03 Archaeplastida
GSVIVT01024262001 No alias RNA processing.RNA splicing.spliceosome... 0.03 Archaeplastida
Gb_12223 No alias STIPL spliceosome disassembly factor 0.07 Archaeplastida
MA_10426814g0010 No alias STIPL spliceosome disassembly factor 0.03 Archaeplastida
Mp3g09910.1 No alias STIPL spliceosome disassembly factor 0.03 Archaeplastida
Mp3g24100.1 No alias STIPL spliceosome disassembly factor 0.03 Archaeplastida
Solyc10g005990.4.1 No alias STIPL spliceosome disassembly factor 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022159 STIP/TFIP11_N 6 95
IPR022783 GCFC_dom 402 673
IPR000467 G_patch_dom 184 225
No external refs found!