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  5. Pp3c1_1000V3.1

Pp3c1_1000V3.1


Description : plastid transcriptionally active 6


Gene families : OG0007314 (Archaeplastida) Phylogenetic Tree(s): OG0007314_tree ,
OG_05_0006292 (LandPlants) Phylogenetic Tree(s): OG_05_0006292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_1000V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00136520 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 Archaeplastida
AT1G21600 PTAC6 plastid transcriptionally active 6 0.1 Archaeplastida
GSVIVT01008807001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 Archaeplastida
Gb_31724 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g01890.1 No alias PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.06 Archaeplastida
Mp8g10030.1 No alias PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.23 Archaeplastida
Solyc04g057870.3.1 No alias PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.06 Archaeplastida
Zm00001e023958_P002 No alias No annotation 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!