1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_10470V3.1

Pp3c1_10470V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0016252 (LandPlants) Phylogenetic Tree(s): OG_05_0016252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_10470V3.1
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G14420 AT59 Pectate lyase family protein 0.01 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.09 Archaeplastida
AT4G24780 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G15110 No alias Pectate lyase family protein 0.01 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
GSVIVT01024239001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
Gb_02248 No alias pectate lyase 0.04 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.01 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.01 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.05 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.05 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.04 Archaeplastida
MA_1164682g0010 No alias pectate lyase 0.05 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.09 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.02 Archaeplastida
MA_394910g0010 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.1 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.02 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.07 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.05 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.05 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.07 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.02 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.01 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.01 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.04 Archaeplastida
Zm00001e004654_P002 No alias pectate lyase 0.02 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!