AT1G19100

Description : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

Gene families : OG0000851 (Archaeplastida) Phylogenetic Tree(s): OG0000851_tree ,
OG_05_0000786 (LandPlants) Phylogenetic Tree(s): OG_05_0000786_tree ,
OG_06_0001754 (SeedPlants) Phylogenetic Tree(s): OG_06_0001754_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19100
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01032432001	No alias	Chromatin organisation.DNA methylation.canonical...	0.04	Archaeplastida
Gb_17013	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.03	Archaeplastida
Mp1g01480.1	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.02	Archaeplastida
Solyc01g099300.3.1	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.03	Archaeplastida
Zm00001e008475_P002	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.08	Archaeplastida
Zm00001e024729_P003	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.04	Archaeplastida
Zm00001e036992_P001	No alias	MORC-type auxiliary factor of DNA methylation pathway	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006342	chromatin silencing	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016458	gene silencing	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IDA	Interproscan
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031047	gene silencing by RNA	None	Extended
BP	GO:0031048	chromatin silencing by small RNA	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031935	regulation of chromatin silencing	IMP	Interproscan
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0040029	regulation of gene expression, epigenetic	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0045132	meiotic chromosome segregation	RCA	Interproscan
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0045892	negative regulation of transcription, DNA-templated	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060968	regulation of gene silencing	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080188	RNA-directed DNA methylation	IMP	Interproscan
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0098813	nuclear chromosome segregation	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1902275	regulation of chromatin organization	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000418	RNA polymerase IV complex	IEP	Neighborhood
CC	GO:0000419	RNA polymerase V complex	IEP	Neighborhood
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Neighborhood
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	Neighborhood
CC	GO:0000790	nuclear chromatin	IEP	Neighborhood
CC	GO:0000791	euchromatin	IEP	Neighborhood
CC	GO:0000792	heterochromatin	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0003724	RNA helicase activity	IEP	Neighborhood
MF	GO:0003725	double-stranded RNA binding	IEP	Neighborhood
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004819	glutamine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005720	nuclear heterochromatin	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006346	methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006424	glutamyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007267	cell-cell signaling	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
BP	GO:0008300	isoprenoid catabolic process	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009616	virus induced gene silencing	IEP	Neighborhood
BP	GO:0009685	gibberellin metabolic process	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
MF	GO:0009899	ent-kaurene synthase activity	IEP	Neighborhood
BP	GO:0009900	dehiscence	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009910	negative regulation of flower development	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010030	positive regulation of seed germination	IEP	Neighborhood
BP	GO:0010047	fruit dehiscence	IEP	Neighborhood
BP	GO:0010050	vegetative phase change	IEP	Neighborhood
BP	GO:0010080	regulation of floral meristem growth	IEP	Neighborhood
BP	GO:0010081	regulation of inflorescence meristem growth	IEP	Neighborhood
BP	GO:0010262	somatic embryogenesis	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010639	negative regulation of organelle organization	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016103	diterpenoid catabolic process	IEP	Neighborhood
BP	GO:0016115	terpenoid catabolic process	IEP	Neighborhood
BP	GO:0016246	RNA interference	IEP	Neighborhood
BP	GO:0016441	posttranscriptional gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0018345	protein palmitoylation	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0023052	signaling	IEP	Neighborhood
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	Neighborhood
CC	GO:0030880	RNA polymerase complex	IEP	Neighborhood
BP	GO:0031050	dsRNA fragmentation	IEP	Neighborhood
BP	GO:0031936	negative regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
MF	GO:0035064	methylated histone binding	IEP	Neighborhood
BP	GO:0035194	posttranscriptional gene silencing by RNA	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
BP	GO:0035510	DNA dealkylation	IEP	Neighborhood
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040030	regulation of molecular function, epigenetic	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
BP	GO:0044003	modification by symbiont of host morphology or physiology	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0044419	interspecies interaction between organisms	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0045487	gibberellin catabolic process	IEP	Neighborhood
BP	GO:0045815	positive regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0045857	negative regulation of molecular function, epigenetic	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048581	negative regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051093	negative regulation of developmental process	IEP	Neighborhood
BP	GO:0051129	negative regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051607	defense response to virus	IEP	Neighborhood
BP	GO:0051701	interaction with host	IEP	Neighborhood
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052018	modulation by symbiont of RNA levels in host	IEP	Neighborhood
BP	GO:0052249	modulation of RNA levels in other organism involved in symbiotic interaction	IEP	Neighborhood
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Neighborhood
BP	GO:0060860	regulation of floral organ abscission	IEP	Neighborhood
BP	GO:0060862	negative regulation of floral organ abscission	IEP	Neighborhood
BP	GO:0060867	fruit abscission	IEP	Neighborhood
BP	GO:0060969	negative regulation of gene silencing	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0070734	histone H3-K27 methylation	IEP	Neighborhood
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	Neighborhood
BP	GO:0070988	demethylation	IEP	Neighborhood
BP	GO:0071365	cellular response to auxin stimulus	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
BP	GO:0080111	DNA demethylation	IEP	Neighborhood
BP	GO:0098586	cellular response to virus	IEP	Neighborhood
MF	GO:0140030	modification-dependent protein binding	IEP	Neighborhood
MF	GO:0140034	methylation-dependent protein binding	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905268	negative regulation of chromatin organization	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Neighborhood
BP	GO:2000034	regulation of seed maturation	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2000242	negative regulation of reproductive process	IEP	Neighborhood
BP	GO:2000692	negative regulation of seed maturation	IEP	Neighborhood
BP	GO:2001251	negative regulation of chromosome organization	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G19100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation