AT1G19100


Description : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein


Gene families : OG0000851 (Archaeplastida) Phylogenetic Tree(s): OG0000851_tree ,
OG_05_0000786 (LandPlants) Phylogenetic Tree(s): OG_05_0000786_tree ,
OG_06_0001754 (SeedPlants) Phylogenetic Tree(s): OG_06_0001754_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G19100
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032432001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
Gb_17013 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida
Mp1g01480.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.02 Archaeplastida
Solyc01g099300.3.1 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida
Zm00001e008475_P002 No alias MORC-type auxiliary factor of DNA methylation pathway 0.08 Archaeplastida
Zm00001e024729_P003 No alias MORC-type auxiliary factor of DNA methylation pathway 0.04 Archaeplastida
Zm00001e036992_P001 No alias MORC-type auxiliary factor of DNA methylation pathway 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
MF GO:0016887 ATPase activity IDA Interproscan
BP GO:0031048 chromatin silencing by small RNA RCA Interproscan
BP GO:0031935 regulation of chromatin silencing IMP Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
BP GO:0080188 RNA-directed DNA methylation IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
CC GO:0000419 RNA polymerase V complex IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0000712 resolution of meiotic recombination intermediates IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000791 euchromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004819 glutamine-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006424 glutamyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008300 isoprenoid catabolic process IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0009899 ent-kaurene synthase activity IEP Neighborhood
BP GO:0009900 dehiscence IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010080 regulation of floral meristem growth IEP Neighborhood
BP GO:0010081 regulation of inflorescence meristem growth IEP Neighborhood
BP GO:0010262 somatic embryogenesis IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016103 diterpenoid catabolic process IEP Neighborhood
BP GO:0016115 terpenoid catabolic process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018345 protein palmitoylation IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031936 negative regulation of chromatin silencing IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035064 methylated histone binding IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035510 DNA dealkylation IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040030 regulation of molecular function, epigenetic IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042447 hormone catabolic process IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045487 gibberellin catabolic process IEP Neighborhood
BP GO:0045815 positive regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045857 negative regulation of molecular function, epigenetic IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0060860 regulation of floral organ abscission IEP Neighborhood
BP GO:0060862 negative regulation of floral organ abscission IEP Neighborhood
BP GO:0060867 fruit abscission IEP Neighborhood
BP GO:0060969 negative regulation of gene silencing IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0070734 histone H3-K27 methylation IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0070988 demethylation IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0080111 DNA demethylation IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
MF GO:0140030 modification-dependent protein binding IEP Neighborhood
MF GO:0140034 methylation-dependent protein binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905268 negative regulation of chromatin organization IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2000692 negative regulation of seed maturation IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!