Pp3c1_11990V3.1


Description : SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Gene families : OG0003440 (Archaeplastida) Phylogenetic Tree(s): OG0003440_tree ,
OG_05_0004308 (LandPlants) Phylogenetic Tree(s): OG_05_0004308_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_11990V3.1
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00182220 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
AT2G39340 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.03 Archaeplastida
Cpa|evm.model.tig00020816.8 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
GSVIVT01032627001 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
LOC_Os01g61930.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.04 Archaeplastida
MA_39508g0010 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 Archaeplastida
Mp8g06380.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.04 Archaeplastida
Solyc05g054910.3.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.03 Archaeplastida
Zm00001e027254_P001 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.05 Archaeplastida
Zm00001e031846_P004 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term BreadthfirstName Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!