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  5. Pp3c1_16920V3.1

Pp3c1_16920V3.1


Description : C2H2-like zinc finger protein


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_16920V3.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.04 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01009680001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01025658001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.05 Archaeplastida
Solyc01g005060.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g099340.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g074780.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc11g069240.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e003968_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034317_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!