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  5. Pp3c1_20770V3.1

Pp3c1_20770V3.1


Description : RPA70-kDa subunit B


Gene families : OG0002905 (Archaeplastida) Phylogenetic Tree(s): OG0002905_tree ,
OG_05_0005884 (LandPlants) Phylogenetic Tree(s): OG_05_0005884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_20770V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00046110 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.08 Archaeplastida
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.11 Archaeplastida
AT5G61000 RPA70D, ATRPA70D Replication factor-A protein 1-related 0.1 Archaeplastida
Cre16.g651000 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.07 Archaeplastida
GSVIVT01007849001 No alias Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.09 Archaeplastida
Gb_17349 No alias component RPA1 of single-stranded-DNA binding RPA... 0.1 Archaeplastida
LOC_Os03g11540.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.09 Archaeplastida
MA_10327014g0020 No alias component RPA1 of RPA presynaptic filament assembly... 0.02 Archaeplastida
MA_10328650g0010 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.01 Archaeplastida
MA_10331305g0010 No alias component RPA1 of RPA presynaptic filament assembly... 0.05 Archaeplastida
Mp2g17030.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.13 Archaeplastida
Solyc03g115050.3.1 No alias component RPA1 of single-stranded-DNA binding RPA... 0.1 Archaeplastida
Zm00001e000841_P002 No alias component RPA1 of single-stranded-DNA binding RPA... 0.12 Archaeplastida
Zm00001e038720_P001 No alias component RPA1 of single-stranded-DNA binding RPA... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 326 472
IPR031657 REPA_OB_2 167 265
IPR004365 NA-bd_OB_tRNA 49 134
No external refs found!