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  5. Pp3c1_22810V3.1

Pp3c1_22810V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0084216 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_22810V3.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G24130 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G26810 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G55590 QRT1 Pectin lyase-like superfamily protein 0.01 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
MA_98283g0010 No alias pectin methylesterase 0.01 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp4g01190.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c12_23790V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_15080V3.1 No alias pectin methylesterase 31 0.02 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc05g052120.4.1 No alias No annotation 0.02 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035522_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!