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  5. Pp3c1_24700V3.1

Pp3c1_24700V3.1


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG0000695 (Archaeplastida) Phylogenetic Tree(s): OG0000695_tree ,
OG_05_0003605 (LandPlants) Phylogenetic Tree(s): OG_05_0003605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_24700V3.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT3G06480 No alias DEAD box RNA helicase family protein 0.03 Archaeplastida
AT5G63120 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
GSVIVT01007665001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
Gb_31459 No alias pre-mRNA splicing regulator (DDX5) 0.02 Archaeplastida
LOC_Os01g68320.2 No alias pre-mRNA splicing regulator (DDX5) 0.02 Archaeplastida
MA_10432707g0010 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.02 Archaeplastida
MA_19015g0010 No alias pre-mRNA splicing regulator (DDX5) 0.04 Archaeplastida
Mp4g22900.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g057760.4.1 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g112350.4.1 No alias pre-mRNA splicing regulator (DDX5) 0.03 Archaeplastida
Zm00001e011376_P001 No alias ATP-dependent RNA helicase-like protein DB10... 0.03 Archaeplastida
Zm00001e020727_P006 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e027719_P003 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!