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  5. Pp3c1_25410V3.1

Pp3c1_25410V3.1


Description : Mitochondrial transcription termination factor family protein


Gene families : OG0001159 (Archaeplastida) Phylogenetic Tree(s): OG0001159_tree ,
OG_05_0031534 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_25410V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00060270 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT2G21710 EMB2219 Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
AT4G02990 No alias Mitochondrial transcription termination factor family protein 0.05 Archaeplastida
GSVIVT01011061001 No alias RNA processing.organelle machineries.RNA... 0.04 Archaeplastida
Gb_07758 No alias transcription factor (mTERF) 0.09 Archaeplastida
Gb_36311 No alias transcription factor (mTERF). mTERF4 plastidial RNA... 0.06 Archaeplastida
LOC_Os05g33500.1 No alias transcription factor (mTERF). mTERF4 plastidial RNA... 0.09 Archaeplastida
LOC_Os07g04230.1 No alias transcription factor (mTERF) 0.08 Archaeplastida
MA_15876g0010 No alias transcription factor (mTERF). mTERF4 plastidial RNA... 0.09 Archaeplastida
MA_78196g0010 No alias transcription factor (mTERF). mTERF4 plastidial RNA... 0.02 Archaeplastida
Mp1g22560.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Smo92242 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Solyc04g005630.3.1 No alias transcription factor (mTERF). mTERF4 plastidial RNA... 0.04 Archaeplastida
Zm00001e032771_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!