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AT4G24900


Description : unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG0006064 (Archaeplastida) Phylogenetic Tree(s): OG0006064_tree ,
OG_05_0005066 (LandPlants) Phylogenetic Tree(s): OG_05_0005066_tree ,
OG_06_0005188 (SeedPlants) Phylogenetic Tree(s): OG_06_0005188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24900
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008547001 No alias TITAN-like protein OS=Arabidopsis thaliana 0.04 Archaeplastida
Mp1g09570.1 No alias TITAN-like protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e010123_P001 No alias TITAN-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
BP GO:0009960 endosperm development IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0000182 rDNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0006360 transcription by RNA polymerase I IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0010348 lithium:proton antiporter activity IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
BP GO:0010352 lithium ion export across the plasma membrane IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
MF GO:0016929 SUMO-specific protease activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0080084 5S rDNA binding IEP Neighborhood
BP GO:0140115 export across plasma membrane IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028015 CCDC84 12 391
No external refs found!