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  5. Pp3c1_28760V3.1

Pp3c1_28760V3.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0005458 (LandPlants) Phylogenetic Tree(s): OG_05_0005458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_28760V3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00121530 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g26460,... 0.03 Archaeplastida
AT1G26460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Archaeplastida
Gb_21554 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.08 Archaeplastida
LOC_Os07g40800.1 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.06 Archaeplastida
MA_10436610g0010 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.04 Archaeplastida
Mp1g25580.1 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.09 Archaeplastida
Solyc05g012390.4.1 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.1 Archaeplastida
Zm00001e010701_P001 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.03 Archaeplastida
Zm00001e035476_P002 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!