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  5. Pp3c1_290V3.1

Pp3c1_290V3.1


Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG0007221 (Archaeplastida) Phylogenetic Tree(s): OG0007221_tree ,
OG_05_0005184 (LandPlants) Phylogenetic Tree(s): OG_05_0005184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_290V3.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_25280V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c11_13900V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c15_13750V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c16_12570V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c2_390V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 427 773
IPR006133 DNA-dir_DNA_pol_B_exonuc 30 334
No external refs found!