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  5. Pp3c1_29660V3.1

Pp3c1_29660V3.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0003180 (Archaeplastida) Phylogenetic Tree(s): OG0003180_tree ,
OG_05_0004342 (LandPlants) Phylogenetic Tree(s): OG_05_0004342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_29660V3.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00143180 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AMTR_s00111p00143660 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AT3G63460 No alias transducin family protein / WD-40 repeat family protein 0.06 Archaeplastida
Cpa|evm.model.tig00001154.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Cpa|evm.model.tig00001154.4 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Cre12.g522450 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01001441001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Gb_38895 No alias scaffolding component Sec31 of coat protein complex 0.06 Archaeplastida
LOC_Os07g46370.1 No alias scaffolding component Sec31 of coat protein complex 0.01 Archaeplastida
MA_10435529g0010 No alias scaffolding component Sec31 of coat protein complex 0.04 Archaeplastida
MA_57417g0010 No alias scaffolding component Sec31 of coat protein complex 0.04 Archaeplastida
MA_9006479g0010 No alias scaffolding component Sec31 of coat protein complex 0.03 Archaeplastida
Mp7g09730.1 No alias scaffolding component Sec31 of coat protein complex 0.03 Archaeplastida
Smo230767 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 Archaeplastida
Solyc01g088020.3.1 No alias scaffolding component Sec31 of coat protein complex 0.03 Archaeplastida
Zm00001e010894_P003 No alias scaffolding component Sec31 of coat protein complex 0.04 Archaeplastida
Zm00001e035747_P003 No alias scaffolding component Sec31 of coat protein complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!